prophet/python/fbprophet/tests/test_diagnostics.py
2018-05-04 16:15:43 -07:00

235 lines
9.9 KiB
Python

# Copyright (c) 2017-present, Facebook, Inc.
# All rights reserved.
#
# This source code is licensed under the BSD-style license found in the
# LICENSE file in the root directory of this source tree. An additional grant
# of patent rights can be found in the PATENTS file in the same directory.
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import itertools
import numpy as np
import pandas as pd
# fb-block 1 start
import os
from unittest import TestCase
from fbprophet import Prophet
from fbprophet import diagnostics
DATA_all = pd.read_csv(
os.path.join(os.path.dirname(__file__), 'data.csv'), parse_dates=['ds']
)
DATA = DATA_all.head(100)
# fb-block 1 end
# fb-block 2
class TestDiagnostics(TestCase):
def __init__(self, *args, **kwargs):
super(TestDiagnostics, self).__init__(*args, **kwargs)
# Use first 100 record in data.csv
self.__df = DATA
def test_simulated_historical_forecasts(self):
m = Prophet()
m.fit(self.__df)
k = 2
for p in [1, 10]:
for h in [1, 3]:
period = '{} days'.format(p)
horizon = '{} days'.format(h)
df_shf = diagnostics.simulated_historical_forecasts(
m, horizon=horizon, k=k, period=period)
# All cutoff dates should be less than ds dates
self.assertTrue((df_shf['cutoff'] < df_shf['ds']).all())
# The unique size of output cutoff should be equal to 'k'
self.assertEqual(len(np.unique(df_shf['cutoff'])), k)
self.assertEqual(
max(df_shf['ds'] - df_shf['cutoff']),
pd.Timedelta(horizon),
)
dc = df_shf['cutoff'].diff()
dc = dc[dc > pd.Timedelta(0)].min()
self.assertTrue(dc >= pd.Timedelta(period))
# Each y in df_shf and self.__df with same ds should be equal
df_merged = pd.merge(df_shf, self.__df, 'left', on='ds')
self.assertAlmostEqual(
np.sum((df_merged['y_x'] - df_merged['y_y']) ** 2), 0.0)
def test_simulated_historical_forecasts_logistic(self):
m = Prophet(growth='logistic')
df = self.__df.copy()
df['cap'] = 40
m.fit(df)
df_shf = diagnostics.simulated_historical_forecasts(
m, horizon='3 days', k=2, period='3 days')
# All cutoff dates should be less than ds dates
self.assertTrue((df_shf['cutoff'] < df_shf['ds']).all())
# The unique size of output cutoff should be equal to 'k'
self.assertEqual(len(np.unique(df_shf['cutoff'])), 2)
# Each y in df_shf and self.__df with same ds should be equal
df_merged = pd.merge(df_shf, df, 'left', on='ds')
self.assertAlmostEqual(
np.sum((df_merged['y_x'] - df_merged['y_y']) ** 2), 0.0)
def test_simulated_historical_forecasts_extra_regressors(self):
m = Prophet()
m.add_seasonality(name='monthly', period=30.5, fourier_order=5)
m.add_regressor('extra')
df = self.__df.copy()
df['cap'] = 40
df['extra'] = range(df.shape[0])
m.fit(df)
df_shf = diagnostics.simulated_historical_forecasts(
m, horizon='3 days', k=2, period='3 days')
# All cutoff dates should be less than ds dates
self.assertTrue((df_shf['cutoff'] < df_shf['ds']).all())
# The unique size of output cutoff should be equal to 'k'
self.assertEqual(len(np.unique(df_shf['cutoff'])), 2)
# Each y in df_shf and self.__df with same ds should be equal
df_merged = pd.merge(df_shf, df, 'left', on='ds')
self.assertAlmostEqual(
np.sum((df_merged['y_x'] - df_merged['y_y']) ** 2), 0.0)
def test_simulated_historical_forecasts_default_value_check(self):
m = Prophet()
m.fit(self.__df)
# Default value of period should be equal to 0.5 * horizon
df_shf1 = diagnostics.simulated_historical_forecasts(
m, horizon='10 days', k=1)
df_shf2 = diagnostics.simulated_historical_forecasts(
m, horizon='10 days', k=1, period='5 days')
self.assertAlmostEqual(
((df_shf1['y'] - df_shf2['y']) ** 2).sum(), 0.0)
self.assertAlmostEqual(
((df_shf1['yhat'] - df_shf2['yhat']) ** 2).sum(), 0.0)
def test_cross_validation(self):
m = Prophet()
m.fit(self.__df)
# Calculate the number of cutoff points(k)
horizon = pd.Timedelta('4 days')
period = pd.Timedelta('10 days')
k = 5
df_cv = diagnostics.cross_validation(
m, horizon='4 days', period='10 days', initial='90 days')
# The unique size of output cutoff should be equal to 'k'
self.assertEqual(len(np.unique(df_cv['cutoff'])), k)
self.assertEqual(max(df_cv['ds'] - df_cv['cutoff']), horizon)
dc = df_cv['cutoff'].diff()
dc = dc[dc > pd.Timedelta(0)].min()
self.assertTrue(dc >= period)
def test_cross_validation_default_value_check(self):
m = Prophet()
m.fit(self.__df)
# Default value of initial should be equal to 3 * horizon
df_cv1 = diagnostics.cross_validation(
m, horizon='32 days', period='10 days')
df_cv2 = diagnostics.cross_validation(
m, horizon='32 days', period='10 days', initial='96 days')
self.assertAlmostEqual(
((df_cv1['y'] - df_cv2['y']) ** 2).sum(), 0.0)
self.assertAlmostEqual(
((df_cv1['yhat'] - df_cv2['yhat']) ** 2).sum(), 0.0)
def test_performance_metrics(self):
m = Prophet()
m.fit(self.__df)
df_cv = diagnostics.cross_validation(
m, horizon='4 days', period='10 days', initial='90 days')
# Aggregation level none
df_none = diagnostics.performance_metrics(df_cv, rolling_window=0)
self.assertEqual(
set(df_none.columns),
{'horizon', 'coverage', 'mae', 'mape', 'mse', 'rmse'},
)
self.assertEqual(df_none.shape[0], 14)
# Aggregation level 0.2
df_horizon = diagnostics.performance_metrics(df_cv, rolling_window=0.2)
self.assertEqual(len(df_horizon['horizon'].unique()), 4)
self.assertEqual(df_horizon.shape[0], 13)
# Aggregation level all
df_all = diagnostics.performance_metrics(df_cv, rolling_window=1)
self.assertEqual(df_all.shape[0], 1)
for metric in ['mse', 'mape', 'mae', 'coverage']:
self.assertEqual(df_all[metric].values[0], df_none[metric].mean())
# Custom list of metrics
df_horizon = diagnostics.performance_metrics(
df_cv, metrics=['coverage', 'mse'],
)
self.assertEqual(
set(df_horizon.columns),
{'coverage', 'mse', 'horizon'},
)
def test_copy(self):
df = DATA_all.copy()
df['cap'] = 200.
df['binary_feature'] = [0] * 255 + [1] * 255
# These values are created except for its default values
holiday = pd.DataFrame(
{'ds': pd.to_datetime(['2016-12-25']), 'holiday': ['x']})
products = itertools.product(
['linear', 'logistic'], # growth
[None, pd.to_datetime(['2016-12-25'])], # changepoints
[3], # n_changepoints
[True, False], # yearly_seasonality
[True, False], # weekly_seasonality
[True, False], # daily_seasonality
[None, holiday], # holidays
[1.1], # seasonality_prior_scale
[1.1], # holidays_prior_scale
[0.1], # changepoint_prior_scale
[100], # mcmc_samples
[0.9], # interval_width
[200] # uncertainty_samples
)
# Values should be copied correctly
for product in products:
m1 = Prophet(*product)
m1.history = m1.setup_dataframe(
df.copy(), initialize_scales=True)
m1.set_auto_seasonalities()
m2 = diagnostics.prophet_copy(m1)
self.assertEqual(m1.growth, m2.growth)
self.assertEqual(m1.n_changepoints, m2.n_changepoints)
self.assertEqual(m1.changepoints, m2.changepoints)
self.assertEqual(False, m2.yearly_seasonality)
self.assertEqual(False, m2.weekly_seasonality)
self.assertEqual(False, m2.daily_seasonality)
self.assertEqual(
m1.yearly_seasonality, 'yearly' in m2.seasonalities)
self.assertEqual(
m1.weekly_seasonality, 'weekly' in m2.seasonalities)
self.assertEqual(
m1.daily_seasonality, 'daily' in m2.seasonalities)
if m1.holidays is None:
self.assertEqual(m1.holidays, m2.holidays)
else:
self.assertTrue((m1.holidays == m2.holidays).values.all())
self.assertEqual(m1.seasonality_prior_scale, m2.seasonality_prior_scale)
self.assertEqual(m1.changepoint_prior_scale, m2.changepoint_prior_scale)
self.assertEqual(m1.holidays_prior_scale, m2.holidays_prior_scale)
self.assertEqual(m1.mcmc_samples, m2.mcmc_samples)
self.assertEqual(m1.interval_width, m2.interval_width)
self.assertEqual(m1.uncertainty_samples, m2.uncertainty_samples)
# Check for cutoff and custom seasonality and extra regressors
changepoints = pd.date_range('2012-06-15', '2012-09-15')
cutoff = pd.Timestamp('2012-07-25')
m1 = Prophet(changepoints=changepoints)
m1.add_seasonality('custom', 10, 5)
m1.add_regressor('binary_feature')
m1.fit(df)
m2 = diagnostics.prophet_copy(m1, cutoff=cutoff)
changepoints = changepoints[changepoints <= cutoff]
self.assertTrue((changepoints == m2.changepoints).all())
self.assertTrue('custom' in m2.seasonalities)
self.assertTrue('binary_feature' in m2.extra_regressors)