prophet/python/fbprophet/diagnostics.py
Ben Letham 014b3b5919
Merge bugfixes from master into v0.3 (#393)
* Update memory requirement description per #326

* Fix R warning with extra regressor; disallow constant extra regressors.

* Fix unit test broken in new pandas

* Fix diagnostics unit tests for new pandas

* Fix copy with extra seasonalities / regressors Py

* Fix copy with extra seasonalities / regressors R

* Fix weekly_start and yearly_start in R plot_components

* Fix plotting in pandas 0.21 by using pydatetime instead of numpy

* Version bump

* Update README for new version

* Fix missing columns in SHF with extra regressor
2017-12-22 16:30:18 -08:00

147 lines
5.2 KiB
Python

# Copyright (c) 2017-present, Facebook, Inc.
# All rights reserved.
#
# This source code is licensed under the BSD-style license found in the
# LICENSE file in the root directory of this source tree. An additional grant
# of patent rights can be found in the PATENTS file in the same directory.
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals
import logging
logger = logging.getLogger(__name__)
import numpy as np
import pandas as pd
from functools import reduce
def _cutoffs(df, horizon, k, period):
"""Generate cutoff dates
Parameters
----------
df: pd.DataFrame with historical data
horizon: pd.Timedelta.
Forecast horizon
k: Int number.
The number of forecasts point.
period: pd.Timedelta.
Simulated Forecast will be done at every this period.
Returns
-------
list of pd.Timestamp
"""
# Last cutoff is 'latest date in data - horizon' date
cutoff = df['ds'].max() - horizon
if cutoff < df['ds'].min():
raise ValueError('Less data than horizon.')
result = [cutoff]
for i in range(1, k):
cutoff -= period
# If data does not exist in data range (cutoff, cutoff + horizon]
if not (((df['ds'] > cutoff) & (df['ds'] <= cutoff + horizon)).any()):
# Next cutoff point is 'last date before cutoff in data - horizon'
closest_date = df[df['ds'] <= cutoff].max()['ds']
cutoff = closest_date - horizon
if cutoff < df['ds'].min():
logger.warning(
'Not enough data for requested number of cutoffs! '
'Using {}.'.format(i))
break
result.append(cutoff)
# Sort lines in ascending order
return reversed(result)
def simulated_historical_forecasts(model, horizon, k, period=None):
"""Simulated Historical Forecasts.
Make forecasts from k historical cutoff points, working backwards from
(end - horizon) with a spacing of period between each cutoff.
Parameters
----------
model: Prophet class object.
Fitted Prophet model
horizon: string with pd.Timedelta compatible style, e.g., '5 days',
'3 hours', '10 seconds'.
k: Int number of forecasts point.
period: Optional string with pd.Timedelta compatible style. Simulated
forecast will be done at every this period. If not provided,
0.5 * horizon is used.
Returns
-------
A pd.DataFrame with the forecast, actual value and cutoff.
"""
df = model.history.copy().reset_index(drop=True)
horizon = pd.Timedelta(horizon)
period = 0.5 * horizon if period is None else pd.Timedelta(period)
cutoffs = _cutoffs(df, horizon, k, period)
predicts = []
for cutoff in cutoffs:
# Generate new object with copying fitting options
m = model.copy(cutoff)
# Train model
m.fit(df[df['ds'] <= cutoff])
# Calculate yhat
index_predicted = (df['ds'] > cutoff) & (df['ds'] <= cutoff + horizon)
# Get the columns for the future dataframe
columns = ['ds']
if m.growth == 'logistic':
columns.append('cap')
if m.logistic_floor:
columns.append('floor')
columns.extend(m.extra_regressors.keys())
yhat = m.predict(df[index_predicted][columns])
# Merge yhat(predicts), y(df, original data) and cutoff
predicts.append(pd.concat([
yhat[['ds', 'yhat', 'yhat_lower', 'yhat_upper']],
df[index_predicted][['y']].reset_index(drop=True),
pd.DataFrame({'cutoff': [cutoff] * len(yhat)})
], axis=1))
# Combine all predicted pd.DataFrame into one pd.DataFrame
return reduce(lambda x, y: x.append(y), predicts).reset_index(drop=True)
def cross_validation(model, horizon, period=None, initial=None):
"""Cross-Validation for time series.
Computes forecasts from historical cutoff points. Beginning from initial,
makes cutoffs with a spacing of period up to (end - horizon).
When period is equal to the time interval of the data, this is the
technique described in https://robjhyndman.com/hyndsight/tscv/ .
Parameters
----------
model: Prophet class object. Fitted Prophet model
horizon: string with pd.Timedelta compatible style, e.g., '5 days',
'3 hours', '10 seconds'.
period: string with pd.Timedelta compatible style. Simulated forecast will
be done at every this period. If not provided, 0.5 * horizon is used.
initial: string with pd.Timedelta compatible style. The first training
period will begin here. If not provided, 3 * horizon is used.
Returns
-------
A pd.DataFrame with the forecast, actual value and cutoff.
"""
te = model.history['ds'].max()
ts = model.history['ds'].min()
horizon = pd.Timedelta(horizon)
period = 0.5 * horizon if period is None else pd.Timedelta(period)
initial = 3 * horizon if initial is None else pd.Timedelta(initial)
k = int(np.ceil(((te - horizon) - (ts + initial)) / period))
if k < 1:
raise ValueError(
'Not enough data for specified horizon, period, and initial.')
return simulated_historical_forecasts(model, horizon, k, period)