Make component plots work if forecast range is less than seasonality period

This commit is contained in:
Ben Letham 2017-04-10 18:20:06 -07:00
parent 50ddd5bfd3
commit 208399678c
5 changed files with 46 additions and 46 deletions

View file

@ -964,11 +964,11 @@ prophet_plot_components <- function(m, fcst, uncertainty = TRUE) {
}
# Plot weekly seasonality, if present
if ("weekly" %in% colnames(df)) {
panels[[length(panels) + 1]] <- plot_weekly(df, uncertainty)
panels[[length(panels) + 1]] <- plot_weekly(m, uncertainty)
}
# Plot yearly seasonality, if present
if ("yearly" %in% colnames(df)) {
panels[[length(panels) + 1]] <- plot_yearly(df, uncertainty)
panels[[length(panels) + 1]] <- plot_yearly(m, uncertainty)
}
# Make the plot.
grid::grid.newpage()
@ -988,9 +988,10 @@ prophet_plot_components <- function(m, fcst, uncertainty = TRUE) {
#'
#' @return A ggplot2 plot.
plot_trend <- function(df, uncertainty = TRUE) {
gg.trend <- ggplot2::ggplot(df, ggplot2::aes(x = ds, y = trend)) +
df.t <- df[!is.na(df$trend),]
gg.trend <- ggplot2::ggplot(df.t, ggplot2::aes(x = ds, y = trend)) +
ggplot2::geom_line(color = "#0072B2", na.rm = TRUE)
if (exists('cap', where = df)) {
if (exists('cap', where = df.t)) {
gg.trend <- gg.trend + ggplot2::geom_line(ggplot2::aes(y = cap),
linetype = 'dashed',
na.rm = TRUE)
@ -1021,6 +1022,7 @@ plot_holidays <- function(m, df, uncertainty = TRUE) {
"_lower"), drop = FALSE]),
holidays_upper = rowSums(df[, paste0(holiday.comps,
"_upper"), drop = FALSE]))
df.s <- df.s[!is.na(df.s$holidays),]
# NOTE the above CI calculation is incorrect if holidays overlap in time.
# Since it is just for the visualization we will not worry about it now.
gg.holidays <- ggplot2::ggplot(df.s, ggplot2::aes(x = ds, y = holidays)) +
@ -1038,20 +1040,19 @@ plot_holidays <- function(m, df, uncertainty = TRUE) {
#' Plot the weekly component of the forecast.
#'
#' @param df Forecast dataframe for plotting.
#' @param m Prophet model object
#' @param uncertainty Boolean to plot uncertainty intervals.
#'
#' @return A ggplot2 plot.
plot_weekly <- function(df, uncertainty = TRUE) {
# Get weekday names in current locale
days <- weekdays(seq.Date(as.Date('2017-01-01'), by='d', length.out=7))
df.s <- df %>%
dplyr::mutate(dow = factor(weekdays(ds), levels = days)) %>%
dplyr::group_by(dow) %>%
dplyr::slice(1) %>%
dplyr::ungroup() %>%
dplyr::arrange(dow)
gg.weekly <- ggplot2::ggplot(df.s, ggplot2::aes(x = dow, y = weekly,
plot_weekly <- function(m, uncertainty = TRUE) {
# Compute weekly seasonality for a Sun-Sat sequence of dates.
df.w <- data.frame(ds=seq.Date(zoo::as.Date('2017-01-01'), by='d',
length.out=7))
df.w <- setup_dataframe(m, df.w)$df
seas <- predict_seasonal_components(m, df.w)
seas$dow <- factor(weekdays(df.w$ds), levels=weekdays(df.w$ds))
gg.weekly <- ggplot2::ggplot(seas, ggplot2::aes(x = dow, y = weekly,
group = 1)) +
ggplot2::geom_line(color = "#0072B2", na.rm = TRUE) +
ggplot2::labs(x = "Day of week")
@ -1068,20 +1069,19 @@ plot_weekly <- function(df, uncertainty = TRUE) {
#' Plot the yearly component of the forecast.
#'
#' @param df Forecast dataframe for plotting.
#' @param m Prophet model object.
#' @param uncertainty Boolean to plot uncertainty intervals.
#'
#' @return A ggplot2 plot.
plot_yearly <- function(df, uncertainty = TRUE) {
# Drop year from the dates
df.s <- df %>%
dplyr::mutate(doy = strftime(ds, format = "2000-%m-%d")) %>%
dplyr::group_by(doy) %>%
dplyr::slice(1) %>%
dplyr::ungroup() %>%
dplyr::mutate(doy = zoo::as.Date(doy)) %>%
dplyr::arrange(doy)
gg.yearly <- ggplot2::ggplot(df.s, ggplot2::aes(x = doy, y = yearly,
plot_yearly <- function(m, uncertainty = TRUE) {
# Compute yearly seasonality for a Jan 1 - Dec 31 sequence of dates.
df.y <- data.frame(ds=seq.Date(zoo::as.Date('2017-01-01'), by='d',
length.out=365))
df.y <- setup_dataframe(m, df.y)$df
seas <- predict_seasonal_components(m, df.y)
seas$ds <- df.y$ds
gg.yearly <- ggplot2::ggplot(seas, ggplot2::aes(x = ds, y = yearly,
group = 1)) +
ggplot2::geom_line(color = "#0072B2", na.rm = TRUE) +
ggplot2::scale_x_date(labels = scales::date_format('%B %d')) +

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@ -4,10 +4,10 @@
\alias{plot_weekly}
\title{Plot the weekly component of the forecast.}
\usage{
plot_weekly(df, uncertainty = TRUE)
plot_weekly(m, uncertainty = TRUE)
}
\arguments{
\item{df}{Forecast dataframe for plotting.}
\item{m}{Prophet model object}
\item{uncertainty}{Boolean to plot uncertainty intervals.}
}

View file

@ -4,10 +4,10 @@
\alias{plot_yearly}
\title{Plot the yearly component of the forecast.}
\usage{
plot_yearly(df, uncertainty = TRUE)
plot_yearly(m, uncertainty = TRUE)
}
\arguments{
\item{df}{Forecast dataframe for plotting.}
\item{m}{Prophet model object.}
\item{uncertainty}{Boolean to plot uncertainty intervals.}
}

View file

@ -48,7 +48,7 @@ components model.}
automatic changepoint selection. Large values will allow many changepoints,
small values will allow few changepoints.}
\item{mcmc.samples}{Integer, if great than 0, will do full Bayesian
\item{mcmc.samples}{Integer, if greater than 0, will do full Bayesian
inference with the specified number of MCMC samples. If 0, will do MAP
estimation.}

View file

@ -1006,18 +1006,17 @@ class Prophet(object):
if not ax:
fig = plt.figure(facecolor='w', figsize=(10, 6))
ax = fig.add_subplot(111)
df_s = fcst.copy()
df_s['dow'] = df_s['ds'].dt.weekday_name
df_s = df_s.groupby('dow').first()
days = pd.date_range(start='2017-01-01', periods=7).weekday_name
y_weekly = [df_s.loc[d]['weekly'] for d in days]
y_weekly_l = [df_s.loc[d]['weekly_lower'] for d in days]
y_weekly_u = [df_s.loc[d]['weekly_upper'] for d in days]
artists += ax.plot(range(len(days)), y_weekly, ls='-',
# Compute weekly seasonality for a Sun-Sat sequence of dates.
days = pd.date_range(start='2017-01-01', periods=7)
df_w = pd.DataFrame({'ds': days})
df_w = self.setup_dataframe(df_w)
seas = self.predict_seasonal_components(df_w)
days = days.weekday_name
artists += ax.plot(range(len(days)), seas['weekly'], ls='-',
c='#0072B2')
if uncertainty:
artists += [ax.fill_between(range(len(days)),
y_weekly_l, y_weekly_u,
seas['weekly_lower'], seas['weekly_upper'],
color='#0072B2', alpha=0.2)]
ax.grid(True, which='major', c='gray', ls='-', lw=1, alpha=0.2)
ax.set_xticks(range(len(days)))
@ -1044,15 +1043,16 @@ class Prophet(object):
if not ax:
fig = plt.figure(facecolor='w', figsize=(10, 6))
ax = fig.add_subplot(111)
df_s = fcst.copy()
df_s['doy'] = df_s['ds'].map(lambda x: x.strftime('2000-%m-%d'))
df_s = df_s.groupby('doy').first().sort_index()
artists += ax.plot(pd.to_datetime(df_s.index), df_s['yearly'], ls='-',
# Compute yearly seasonality for a Jan 1 - Dec 31 sequence of dates.
df_y = pd.DataFrame({'ds': pd.date_range(start='2017-01-01', periods=365)})
df_y = self.setup_dataframe(df_y)
seas = self.predict_seasonal_components(df_y)
artists += ax.plot(df_y['ds'], seas['yearly'], ls='-',
c='#0072B2')
if uncertainty:
artists += [ax.fill_between(
pd.to_datetime(df_s.index), df_s['yearly_lower'],
df_s['yearly_upper'], color='#0072B2', alpha=0.2)]
df_y['ds'].values, seas['yearly_lower'],
seas['yearly_upper'], color='#0072B2', alpha=0.2)]
ax.grid(True, which='major', c='gray', ls='-', lw=1, alpha=0.2)
months = MonthLocator(range(1, 13), bymonthday=1, interval=2)
ax.xaxis.set_major_formatter(FuncFormatter(