onnxruntime/onnxruntime/python/tools/transformers/onnx_model_bert.py
Tianlei Wu e96a829e84
Handle multiple embed nodes in transformer optimizer (#4471)
Handle model with multiple embed nodes:
* update embed layer norm fusion in onnxruntime
* Fix temp model path in optimizer
* Add unit test for model with multiple embed nodes.
* Add unit test for gpt2 fusion with past state and mask
* Add unit test for change input to int32
2020-07-10 15:28:27 -07:00

303 lines
12 KiB
Python

#-------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License.
#--------------------------------------------------------------------------
from logging import getLogger
from onnx import TensorProto, helper
from onnx_model import OnnxModel
from fusion_reshape import FusionReshape
from fusion_layernorm import FusionLayerNormalization, FusionLayerNormalizationTF
from fusion_skiplayernorm import FusionSkipLayerNormalization, FusionBiasSkipLayerNormalization
from fusion_embedlayer import FusionEmbedLayerNormalization
from fusion_attention import FusionAttention, AttentionMask, AttentionMaskFormat
from fusion_gelu import FusionGelu
from fusion_fastgelu import FusionFastGelu
from fusion_biasgelu import FusionBiasGelu
from fusion_gelu_approximation import FusionGeluApproximation
from fusion_utils import FusionUtils
logger = getLogger(__name__)
class BertOptimizationOptions:
def __init__(self, model_type):
self.enable_gelu = True
self.enable_layer_norm = True
self.enable_attention = True
self.enable_skip_layer_norm = True
self.enable_embed_layer_norm = True
self.enable_bias_skip_layer_norm = True
self.enable_bias_gelu = True
self.enable_gelu_approximation = False
self.attention_mask_format = AttentionMaskFormat.MaskIndexEnd
if model_type == 'gpt2':
self.enable_skip_layer_norm = False
self.attention_mask_format = AttentionMaskFormat.AttentionMask
def use_raw_attention_mask(self):
self.attention_mask_format = AttentionMaskFormat.AttentionMask
class BertOnnxModel(OnnxModel):
def __init__(self, model, num_heads, hidden_size):
assert num_heads > 0
assert hidden_size % num_heads == 0
super().__init__(model)
self.num_heads = num_heads
self.hidden_size = hidden_size
self.attention_mask = AttentionMask(self)
self.attention_fusion = FusionAttention(self, self.hidden_size, self.num_heads, self.attention_mask)
def fuse_attention(self):
self.attention_fusion.apply()
def fuse_gelu(self):
fusion = FusionGelu(self)
fusion.apply()
fusion = FusionFastGelu(self)
fusion.apply()
def fuse_bias_gelu(self, is_fastgelu):
fusion = FusionBiasGelu(self, is_fastgelu)
fusion.apply()
def gelu_approximation(self):
fusion = FusionGeluApproximation(self)
fusion.apply()
def fuse_add_bias_skip_layer_norm(self):
fusion = FusionBiasSkipLayerNormalization(self)
fusion.apply()
def fuse_reshape(self):
fusion = FusionReshape(self)
fusion.apply()
def fuse_embed_layer(self):
fusion = FusionEmbedLayerNormalization(self)
fusion.apply()
def fuse_layer_norm(self):
fusion = FusionLayerNormalization(self)
fusion.apply()
fusion = FusionLayerNormalizationTF(self)
fusion.apply()
def fuse_skip_layer_norm(self):
fusion = FusionSkipLayerNormalization(self)
fusion.apply()
def get_graph_inputs_from_embed_nodes(self, casted=False):
"""
Get graph inputs that feed into EmbedLayerNormaliazation.
Returns a list of the graph input names based on the filter whether it is casted or not.
"""
embed_graph_inputs = []
output_name_to_node = self.output_name_to_node()
embed_nodes = self.get_nodes_by_op_type('EmbedLayerNormalization')
for embed_node in embed_nodes:
bert_inputs = embed_node.input[:2] + embed_node.input[
7:] # inputs 0, 1 and 7 are input_ids, segment_ids and attention mask
for bert_input in bert_inputs:
if self.find_graph_input(bert_input):
if not casted:
embed_graph_inputs.append(bert_input)
elif bert_input in output_name_to_node:
parent = output_name_to_node[bert_input]
if parent.op_type == 'Cast' and self.find_graph_input(parent.input[0]) is not None:
if casted:
embed_graph_inputs.append(parent.input[0])
return embed_graph_inputs
def change_input_to_int32(self):
original_opset_version = self.model.opset_import[0].version
graph = self.graph()
new_graph_inputs = []
casted_bert_graph_inputs = self.get_graph_inputs_from_embed_nodes(casted=True)
utils = FusionUtils(self)
for input in graph.input:
if input.name in casted_bert_graph_inputs:
utils.remove_cast_int32(input.name)
int32_input = helper.make_tensor_value_info(input.name, TensorProto.INT32,
self.tensor_shape_to_list(input.type.tensor_type))
new_graph_inputs.append(int32_input)
else:
new_graph_inputs.append(input)
graph_def = helper.make_graph(graph.node,
'int32 inputs',
new_graph_inputs,
graph.output,
initializer=graph.initializer,
value_info=graph.value_info)
self.model = helper.make_model(graph_def, producer_name='onnxruntime-tools')
# restore opset version
self.model.opset_import[0].version = original_opset_version
def use_dynamic_axes(self, dynamic_batch_dim='batch_size', dynamic_seq_len='max_seq_len'):
"""
Update input and output shape to use dynamic axes.
"""
bert_graph_inputs = self.get_graph_inputs_from_embed_nodes(
casted=True) + self.get_graph_inputs_from_embed_nodes(casted=False)
dynamic_batch_inputs = {}
for input in self.model.graph.input:
if input.name in bert_graph_inputs:
dim_proto = input.type.tensor_type.shape.dim[0]
dim_proto.dim_param = dynamic_batch_dim
if dynamic_seq_len is not None:
dim_proto = input.type.tensor_type.shape.dim[1]
dim_proto.dim_param = dynamic_seq_len
for output in self.model.graph.output:
dim_proto = output.type.tensor_type.shape.dim[0]
dim_proto.dim_param = dynamic_batch_dim
def preprocess(self):
return
def clean_graph(self):
output_name_to_node = self.output_name_to_node()
nodes_to_add = []
nodes_to_remove = []
for node in self.nodes():
# Before:
# input_ids --> Shape --> Gather(indices=0) --> Unsqueeze ------+
# | |
# | v
# +----> Shape --> Gather(indices=1) --> Unsqueeze---> Concat --> ConstantOfShape -->Cast --> EmbedLayerNormaliation/ReduceSum
# After:
# input_ids --> Shape --> ConstantOfShape -->Cast --> EmbedLayerNormaliation/ReduceSum
# TODO: merge ConstantOfShape -->Cast to ConstantOfShape (need update the data type of value)
op_input_id = {"EmbedLayerNormalization": 1, "ReduceSum": 0, "Attention": 3}
if node.op_type in op_input_id:
i = op_input_id[node.op_type]
parent_nodes = self.match_parent_path(
node, ['Cast', 'ConstantOfShape', 'Concat', 'Unsqueeze', 'Gather', 'Shape'], [i, 0, 0, 0, 0, 0],
output_name_to_node)
if parent_nodes is not None:
cast, constantOfShape, concat, unsqueeze, gather, shape = parent_nodes
if shape.input[0] == self.graph().input[0].name:
constantOfShape.input[0] = shape.output[0]
output_name_to_node = self.output_name_to_node()
if node.op_type == 'Attention':
# Before:
# input_ids --> Shape -->ConstantOfShape -->Cast --> ReduceSum --> Attention
# After:
# remove this path, and remove the optional mask_index input of Attention node.
parent_nodes = self.match_parent_path(node, ['ReduceSum', 'Cast', 'ConstantOfShape', 'Shape'],
[3, 0, 0, 0], output_name_to_node)
if parent_nodes is not None:
if parent_nodes[-1].input[0] == self.graph().input[0].name:
attention_node = helper.make_node('Attention',
inputs=node.input[0:len(node.input) - 1],
outputs=node.output,
name=node.name + "_remove_mask")
attention_node.domain = "com.microsoft"
attention_node.attribute.extend([helper.make_attribute("num_heads", self.num_heads)])
nodes_to_add.append(attention_node)
nodes_to_remove.append(node)
self.remove_nodes(nodes_to_remove)
self.add_nodes(nodes_to_add)
def postprocess(self):
self.clean_graph()
self.prune_graph()
def optimize(self, options: BertOptimizationOptions = None, add_dynamic_axes=False):
if (options is None) or options.enable_layer_norm:
self.fuse_layer_norm()
if (options is None) or options.enable_gelu:
self.fuse_gelu()
self.preprocess()
self.fuse_reshape()
if (options is None) or options.enable_skip_layer_norm:
self.fuse_skip_layer_norm()
if (options is None) or options.enable_attention:
if options is not None:
self.attention_mask.set_mask_format(options.attention_mask_format)
self.fuse_attention()
if (options is None) or options.enable_embed_layer_norm:
self.fuse_embed_layer()
# Post-processing like removing extra reshape nodes.
self.postprocess()
# Bias fusion is done after postprocess to avoid extra Reshape between bias and Gelu/FastGelu/SkipLayerNormalization
if (options is None) or options.enable_bias_gelu:
# Fuse Gelu and Add Bias before it.
self.fuse_bias_gelu(is_fastgelu=True)
self.fuse_bias_gelu(is_fastgelu=False)
if (options is None) or options.enable_bias_skip_layer_norm:
# Fuse SkipLayerNormalization and Add Bias before it.
self.fuse_add_bias_skip_layer_norm()
if (options is not None and options.enable_gelu_approximation):
self.gelu_approximation()
self.remove_unused_constant()
# Use symbolic batch dimension in input and output.
if add_dynamic_axes:
self.use_dynamic_axes()
logger.info(f"opset verion: {self.model.opset_import[0].version}")
def get_fused_operator_statistics(self):
"""
Returns node count of fused operators.
"""
op_count = {}
ops = [
'EmbedLayerNormalization', 'Attention', 'Gelu', 'FastGelu', 'BiasGelu', 'LayerNormalization',
'SkipLayerNormalization'
]
for op in ops:
nodes = self.get_nodes_by_op_type(op)
op_count[op] = len(nodes)
logger.info(f"Optimized operators:{op_count}")
return op_count
def is_fully_optimized(self):
"""
Returns True when the model is fully optimized.
"""
op_count = self.get_fused_operator_statistics()
embed = op_count['EmbedLayerNormalization']
attention = op_count['Attention']
gelu = op_count['Gelu'] + op_count['BiasGelu'] + op_count['FastGelu']
layer_norm = op_count['LayerNormalization'] + op_count['SkipLayerNormalization']
is_perfect = (embed > 0) and (attention > 0) and (attention == gelu) and (layer_norm >= 2 * attention)
if layer_norm == 0:
logger.debug("Layer Normalization not fused")
if gelu == 0:
logger.debug("Gelu/FastGelu not fused")
if embed == 0:
logger.debug("Embed Layer not fused")
if attention == 0:
logger.debug("Attention not fused")
return is_perfect