(1) Remove class BertOptimizationOptions that has been deprecated a long
time ago
(2) Move sys path setttings to `__init__.py`, and update imports
(3) Fix bert_perf_test to run properly.
(4) Fix a onnx path in a whisper test case
(5) Fix a few typos
(6) Update comments in bert_perf_test regarding to graph inputs
### Description
`lintrunner` is a linter runner successfully used by pytorch, onnx and
onnx-script. It provides a uniform experience running linters locally
and in CI. It supports all major dev systems: Windows, Linux and MacOs.
The checks are enforced by the `Python format` workflow.
This PR adopts `lintrunner` to onnxruntime and fixed ~2000 flake8 errors
in Python code. `lintrunner` now runs all required python lints
including `ruff`(replacing `flake8`), `black` and `isort`. Future lints
like `clang-format` can be added.
Most errors are auto-fixed by `ruff` and the fixes should be considered
robust.
Lints that are more complicated to fix are applied `# noqa` for now and
should be fixed in follow up PRs.
### Notable changes
1. This PR **removed some suboptimal patterns**:
- `not xxx in` -> `xxx not in` membership checks
- bare excepts (`except:` -> `except Exception`)
- unused imports
The follow up PR will remove:
- `import *`
- mutable values as default in function definitions (`def func(a=[])`)
- more unused imports
- unused local variables
2. Use `ruff` to replace `flake8`. `ruff` is much (40x) faster than
flake8 and is more robust. We are using it successfully in onnx and
onnx-script. It also supports auto-fixing many flake8 errors.
3. Removed the legacy flake8 ci flow and updated docs.
4. The added workflow supports SARIF code scanning reports on github,
example snapshot:
5. Removed `onnxruntime-python-checks-ci-pipeline` as redundant
### Motivation and Context
<!-- - Why is this change required? What problem does it solve?
- If it fixes an open issue, please link to the issue here. -->
Unified linting experience in CI and local.
Replacing https://github.com/microsoft/onnxruntime/pull/14306
---------
Signed-off-by: Justin Chu <justinchu@microsoft.com>
Description: Format all python files under onnxruntime with black and isort.
After checking in, we can use .git-blame-ignore-revs to ignore the formatting PR in git blame.
#11315, #11316
update PyTorch Bert SquAD notebooks to use onnxruntim-tools and update usage of intra_op_num_threads.
rename python files according to coding style
Fix change_input_to_int32.
update keras notebook to copy script from rel-1.3.0 branch (Will update them later)
* Enable optimizer on models with external data (>2GB)
* Refactoring optimizer: move fusion to separate file
* Update benchmark: (1) output datatime to csv (2) Add option --onnx_dir to benchmark.py for onnx model directory path (3) add gpt2-large (4) loose thrsholds for fp16 validation
* update optimizer (1) Add attribute of ConstantOfShape in fp16 conversion (2) Use OnnxRuntime level 1 optimization
* update bert_perf_test.py: rename --input_ids to --input_ids_name
