diff --git a/onnxruntime/core/providers/webgpu/generator/range.cc b/onnxruntime/core/providers/webgpu/generator/range.cc
index ee7c67ec24..a0b65f08a5 100644
--- a/onnxruntime/core/providers/webgpu/generator/range.cc
+++ b/onnxruntime/core/providers/webgpu/generator/range.cc
@@ -25,6 +25,11 @@ Status Range<T>::ComputeInternal(ComputeContext& context) const {
 
   uint32_t output_size = gsl::narrow<uint32_t>(n);
   RangeProgram program{};
+#if defined(__GNUC__)
+#pragma GCC diagnostic push
+#pragma GCC diagnostic ignored "-Wstrict-aliasing"
+#endif
+
   program.AddOutput({output_tensor, ProgramTensorMetadataDependency::Type})
       .SetDispatchGroupSize((output_size + WORKGROUP_SIZE - 1) / WORKGROUP_SIZE)
       .AddUniformVariables({
@@ -33,6 +38,10 @@ Status Range<T>::ComputeInternal(ComputeContext& context) const {
           *reinterpret_cast<uint32_t*>(&delta),
       });
 
+#if defined(__GNUC__)
+#pragma GCC diagnostic pop
+#endif
+
   return context.RunProgram(program);
 }
 
diff --git a/onnxruntime/core/providers/webgpu/math/unary_elementwise_ops.cc b/onnxruntime/core/providers/webgpu/math/unary_elementwise_ops.cc
index 8dcf636710..eaaad206eb 100644
--- a/onnxruntime/core/providers/webgpu/math/unary_elementwise_ops.cc
+++ b/onnxruntime/core/providers/webgpu/math/unary_elementwise_ops.cc
@@ -194,6 +194,10 @@ class Clip final : public UnaryElementwise {
                          "Clip",
                          std::is_same_v<T, MLFloat16> ? ClipF16Impl : ClipImpl,
                          "", ShaderUsage::UseElementTypeAlias} {}
+#if defined(__GNUC__)
+#pragma GCC diagnostic push
+#pragma GCC diagnostic ignored "-Wstrict-aliasing"
+#endif
 
   Status ConfigureProgram(const ComputeContext& context, UnaryElementwiseProgram& program) const override {
     const auto* clip_min_tensor = context.Input<Tensor>(1);
@@ -214,6 +218,9 @@ class Clip final : public UnaryElementwise {
     }
     return Status::OK();
   }
+#if defined(__GNUC__)
+#pragma GCC diagnostic pop
+#endif
 
   // uniforms.attr is a f32 value. It is encoded as a float for 2 f16 values.
   // bitcast<vec2<f16>>(uniforms.attr)[0] is clip_min, bitcast<vec2<f16>>(uniforms.attr)[1] is clip_max
diff --git a/onnxruntime/core/providers/webgpu/program.h b/onnxruntime/core/providers/webgpu/program.h
index 1562ec158b..7bfd9e8800 100644
--- a/onnxruntime/core/providers/webgpu/program.h
+++ b/onnxruntime/core/providers/webgpu/program.h
@@ -150,6 +150,11 @@ enum class ProgramTensorMetadataDependency : int {
 };
 std::ostream& operator<<(std::ostream& os, ProgramTensorMetadataDependency);
 
+#if defined(__GNUC__)
+#pragma GCC diagnostic push
+#pragma GCC diagnostic ignored "-Wstrict-aliasing"
+#endif
+
 inline ProgramTensorMetadataDependency operator|(ProgramTensorMetadataDependency a, ProgramTensorMetadataDependency b) {
   return (ProgramTensorMetadataDependency)((int&)a | (int&)b);
 }
@@ -163,6 +168,10 @@ inline ProgramTensorMetadataDependency& operator&=(ProgramTensorMetadataDependen
   return (ProgramTensorMetadataDependency&)((int&)a &= (int&)b);
 }
 
+#if defined(__GNUC__)
+#pragma GCC diagnostic pop
+#endif
+
 constexpr SafeInt<uint32_t> WORKGROUP_SIZE = 64;
 
 // data type of variable
diff --git a/onnxruntime/core/providers/webgpu/shader_variable.h b/onnxruntime/core/providers/webgpu/shader_variable.h
index 4c87bc9158..2aba2a59d1 100644
--- a/onnxruntime/core/providers/webgpu/shader_variable.h
+++ b/onnxruntime/core/providers/webgpu/shader_variable.h
@@ -189,6 +189,10 @@ class ShaderVariableHelper : public ShaderIndicesHelper {
 
   friend class ShaderHelper;
 };
+#if defined(__GNUC__)
+#pragma GCC diagnostic push
+#pragma GCC diagnostic ignored "-Wstrict-aliasing"
+#endif
 
 inline ShaderUsage operator|(ShaderUsage a, ShaderUsage b) {
   return (uint32_t)a.usage | (uint32_t)b.usage;
@@ -205,6 +209,10 @@ inline ShaderUsage& operator&=(ShaderUsage& a, ShaderUsage b) {
   return a;
 }
 
+#if defined(__GNUC__)
+#pragma GCC diagnostic pop
+#endif
+
 namespace detail {
 template <typename T, typename = std::enable_if_t<std::is_integral_v<T>>>
 std::string pass_as_string(T&& v) {
diff --git a/onnxruntime/core/providers/webgpu/webgpu_context.cc b/onnxruntime/core/providers/webgpu/webgpu_context.cc
index 1c9a16bf36..f7d9420701 100644
--- a/onnxruntime/core/providers/webgpu/webgpu_context.cc
+++ b/onnxruntime/core/providers/webgpu/webgpu_context.cc
@@ -4,12 +4,20 @@
 #include <memory>
 #include <cmath>
 
+#if defined(__GNUC__)
+#pragma GCC diagnostic push
+#pragma GCC diagnostic ignored "-Wstrict-aliasing"
+#endif
+
 #if !defined(__wasm__)
 #include "dawn/dawn_proc.h"
 #if !defined(USE_EXTERNAL_DAWN)
 #include "dawn/native/DawnNative.h"
 #endif
 #endif
+#if defined(__GNUC__)
+#pragma GCC diagnostic pop
+#endif
 
 #include "core/common/common.h"
 #include "core/common/path_string.h"