diff --git a/cgmanifests/generated/cgmanifest.json b/cgmanifests/generated/cgmanifest.json
index cf89f37758..953a1948d2 100644
--- a/cgmanifests/generated/cgmanifest.json
+++ b/cgmanifests/generated/cgmanifest.json
@@ -302,7 +302,7 @@
       "component": {
         "type": "git",
         "git": {
-          "commitHash": "1ba785612a79fe749aa1e478336e534743372639",
+          "commitHash": "ad834eb73ee0cd9b6fa9ea892caeed5fa17d7dc0",
           "repositoryUrl": "https://github.com/onnx/onnx.git"
         },
         "comments": "onnx"
diff --git a/cmake/deps.txt b/cmake/deps.txt
index dcf0294d2c..9d91eb97d2 100644
--- a/cmake/deps.txt
+++ b/cmake/deps.txt
@@ -23,7 +23,7 @@ microsoft_gsl;https://github.com/microsoft/GSL/archive/refs/tags/v4.0.0.zip;cf36
 microsoft_wil;https://github.com/microsoft/wil/archive/5f4caba4e7a9017816e47becdd918fcc872039ba.zip;fd119887d0d17c37adf1fc227b054befa28158ad
 mimalloc;https://github.com/microsoft/mimalloc/archive/refs/tags/v2.0.3.zip;e4f37b93b2da78a5816c2495603a4188d316214b
 mp11;https://github.com/boostorg/mp11/archive/refs/tags/boost-1.79.0.zip;c8f04e378535ededbe5af52c8f969d2dedbe73d5
-onnx;https://github.com/onnx/onnx/archive/refs/tags/v1.13.0.zip;8dda5079cdb5a134b08b0c73f4592a6404fc2dc6
+onnx;https://github.com/onnx/onnx/archive/refs/tags/v1.13.1.zip;7a2517d3e7442109d540de2c86f29cd76d34cf28
 #use the commit where it's several commits after 8.5-GA branch (https://github.com/onnx/onnx-tensorrt/commit/369d6676423c2a6dbf4a5665c4b5010240d99d3c)
 onnx_tensorrt;https://github.com/onnx/onnx-tensorrt/archive/369d6676423c2a6dbf4a5665c4b5010240d99d3c.zip;62119892edfb78689061790140c439b111491275
 protobuf;https://github.com/protocolbuffers/protobuf/archive/refs/tags/v3.20.2.zip;9f71dad95fb83438e88822a9969fc93773fd8c48
diff --git a/onnxruntime/test/testdata/onnx_backend_test_series_filters.jsonc b/onnxruntime/test/testdata/onnx_backend_test_series_filters.jsonc
index 7a9f09c185..d64dbfb7d2 100644
--- a/onnxruntime/test/testdata/onnx_backend_test_series_filters.jsonc
+++ b/onnxruntime/test/testdata/onnx_backend_test_series_filters.jsonc
@@ -133,7 +133,7 @@
         "^test_softplus_example_expanded_cuda",
         "^test_softplus_expanded_cuda",
 
-        // TODO: Recover these real model tests from onnx
+        // TODO(https://github.com/onnx/onnx/issues/4885): remove these tests after they are deprecated in onnx
         "^test_vgg19",
         "^test_zfnet512",
         "^test_bvlc_alexnet",
diff --git a/tools/ci_build/github/azure-pipelines/templates/download-deps.yml b/tools/ci_build/github/azure-pipelines/templates/download-deps.yml
index 0a414440e6..f5e35a3899 100644
--- a/tools/ci_build/github/azure-pipelines/templates/download-deps.yml
+++ b/tools/ci_build/github/azure-pipelines/templates/download-deps.yml
@@ -11,7 +11,7 @@ steps:
       packageType: upack
       feed: '/7424c8e4-5c62-490e-95c4-79446f31017c'
       definition: '517c4f6f-5437-4392-a70d-4f15ec5be2f0'
-      version: 1.0.31
+      version: 1.0.32
       downloadPath: $(Build.BinariesDirectory)/deps
 
 # The private ADO project
@@ -22,7 +22,7 @@ steps:
       packageType: upack
       feed: '/4c7631f5-24c0-4307-8822-1aa8f180c325'
       definition: 'fd9dd5ad-b73e-4678-890e-edcf680dbc1a'
-      version: 1.0.31
+      version: 1.0.32
       downloadPath: $(Build.BinariesDirectory)/deps
 
 # You can add more ADO accounts at here.
diff --git a/tools/ci_build/github/linux/docker/scripts/manylinux/requirements.txt b/tools/ci_build/github/linux/docker/scripts/manylinux/requirements.txt
index cc0513c270..12f6207aa0 100644
--- a/tools/ci_build/github/linux/docker/scripts/manylinux/requirements.txt
+++ b/tools/ci_build/github/linux/docker/scripts/manylinux/requirements.txt
@@ -3,7 +3,7 @@ mypy
 pytest
 setuptools>=41.4.0
 wheel
-onnx==1.13.0
+onnx==1.13.1
 protobuf==3.20.2
 sympy==1.10.1
 flatbuffers
diff --git a/tools/ci_build/github/linux/docker/scripts/requirements.txt b/tools/ci_build/github/linux/docker/scripts/requirements.txt
index 813b97d6c8..6a52358d22 100644
--- a/tools/ci_build/github/linux/docker/scripts/requirements.txt
+++ b/tools/ci_build/github/linux/docker/scripts/requirements.txt
@@ -4,7 +4,7 @@ mypy
 pytest
 setuptools>=41.4.0
 wheel>=0.35.1
-onnx==1.13.0
+onnx==1.13.1
 argparse
 sympy==1.10.1
 flatbuffers